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Phylogeography of Lasiopodomys gregalis (Rodentia: Cricetidae) in the southern part of its geographic range
Petrova T.V., Kuksin A.N., Putintsev N.I., Lopatina N.V., Lissovsky A.A.
P. 102-119
The narrow-headed vole species complex (subgenus Stenocranius) is represented by at least two cryptic species: Lasiopodomys gregalis and L. raddei. One of L. gregalis lineages (lineage B, inhabiting northern Mongolia and neighbouring territories) forms a secondary contact zone with L. raddei. In the current study, we analysed phylogeographic structure of L. gregalis lineage B by means of sequences of mitochondrial cytochrome b and reconstructed ecological niches of both species at present and in the past. The source of the spread of L. gregalis lineage B was probably the territory of modern western Mongolia and southeastern Tuva. Despite seeming continuity of the geographic range of lineage B, mitochondrial clusters within it turned out to be allopatric or parapatric; the reasons for such spatial structure are not yet clear. Based on the ecological niche modelling, it can be hypothesised that the two studied species reacted differently to climatic fluctuations of the late Pleistocene, and the structure of the modern geographic range of L. gregalis lineage B has formed largely due to inter-specific competitive interactions with L. raddei.

DOI: 10.15298/rusjtheriol.22.2.03

References

  • Abramson N.I., Rodchenkova E.N. & Kostygov A.Yu. 2009. Genetic variation and phylogeography of the bank vole (Clethrionomys glareolus, Arvicolinae, Rodentia) in Russia with special reference to the introgression of the mtDNA of a closely related species, red-backed vole (Cl. rutilus) // Russian Journal of Genetics. Vol.45. No.5. P.533–545.

  • Baca M., Popović D., Agadzhanyan A.K., Baca K., Conard N.J., Fewlass H., Filek T., Golubiński M., Horáček I., Knul M.V., Krajcarz M., Krokhaleva M., Lebreton L., Lemanik A., Maul L.C., Nagel D., Noiret P., Primault J., Rekovets L., Rhodes S.E., Royer A., Serdyuk N.V., Soressi M., Stewart J.R., Strukova T., Talamo S., Wilczyński J. & Nadachowski A. 2023. Ancient DNA of narrow-headed vole reveal common features of the Late Pleistocene population dynamics in cold-adapted small mammals // Proceedings of the Royal Society B: Biological Sciences. Vol.290. P.20222238.

  • Baca M., Popović D., Lemanik A., Baca K., Horáček I. & Nadachowski A. 2019. Highly divergent lineage of narrow-headed vole from the Late Pleistocene Europe // Scientific Reports. Vol.9. No.1. P.17799.

  • Bannikova A.A., Lebedev V.S., Lissovsky A.A., Matrosova V., Abramson N.I., Obolenskaya E.V. & Tesakov A.S. 2010. Molecular phylogeny and evolution of the Asian lineage of vole genus Microtus (Rodentia: Arvicolinae) inferred from mitochondrial cytochrome b sequence // Biological Journal of the Linnean Society. Vol.99. No.3. P.595–613.

  • Bouckaert R., Heled J., Kühnert D., Vaughan T., Wu C.-H., Xie D., Suchard M.A., Rambaut A. & Drummond A.J. 2014. BEAST 2: a software platform for Bayesian evolutionary analysis // PLoS Computational Biology. Vol.10. No.4. P.e1003537.

  • Fick S.E. & Hijmans R.J. 2017. WorldClim 2: new 1-km spatial resolution climate surfaces for global land areas // International Journal of Climatology. Vol.37. No.2. P.4302–4315.

  • Gerasimov I.P. & Velichko A.A. 1982. [Paleogeography of Europe during the last 100,000 years (Atlas-Monograph)]. Moscow: Nauka. 175 p. [in Russian].

  • Golubeva L.V. 1978. [Vegetation of Northern Mongolia in the Pleistocene and Holocene (the Selenga and Orkhon River basins)] // Izvestiya Akademii nauk SSSR, Seriya Geologicheskaya. Vol.3. P.68–81 [in Russian].

  • Hall T.A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT // Nucleic Acids Symposium Series. Vol.41. P.95–98.

  • Ho S.Y., Phillips M.J., Cooper A. & Drummond A.J. 2005. Time dependency of molecular rate estimates and systematic overestimation of recent divergence times // Molecular biology and evolution. Vol.22. No.7. P.1561–1568.

  • Hoang D.T., Chernomor O., Von Haeseler A., Minh B.Q. & Vinh L.S. 2018. UFBoot2: improving the ultrafast bootstrap approximation // Molecular Biology and Evolution. Vol.35. No.2. P.518–522.

  • Karamysheva Z.V. 1988. [Latitudinal and longitudinal changes in the montane vegetation of Mongolia // Flora of high-mountain ecosystems of the USSR]. Vladivostok: DVO AN SSSR. P.262–273 [in Russian].

  • Karger D., Conrad O., Böhner J., Kawohl T., Kreft H., Soria-Auza R.W., Zimmermann N.E., Linder H.P. & Kessler M. 2017. Climatologies at high resolution for the earth’s land surface areas // Scientific Data. Vol.4. P.170122.

  • Kass J.M., Muscarella R., Galante P.J., Bohl C.L., Pinilla-Buitrago G.E., Boria R.A., Soley-Guardia M., Anderson R.P. 2021. ENMeval 2.0: Redesigned for customizable and reproducible modeling of species’ niches and distributions // Methods in Ecology and Evolution. Vol.12. P.1602–1608.

  • Kowalski K. 2001. Pleistocene rodents of Europe // Folia Quaternaria. Vol.72. P.3–389.

  • Kumar S., Stecher G. & Tamura K. 2016. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets // Molecular Biology and Evolution. Vol.33. No.7. P.1870–1874.

  • Kyrgys K.V., Namzalov B.B. & Dubrovskii N.G. 2009. [Steppes of Sangilen Plateau (Southeastern Tyva)]. Kyzyl: Tyvinskoe Knizhnoye Izdatelstvo. 160 p. [in Russian].

  • Lanfear R., Frandsen P.B., Wright A.M., Senfeld T. & Calcott B. 2016. PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses // Molecular Biology and Evolution. P.msw260.

  • Makunina N.I., Maltseva T.V. & Parshutina L.P. 2007. [The mountain forest-steppe of Tuva] // Vegetation of Russia. No.10. P.61–88 [in Russian].

  • Markova A. & Van Kolfschoten T. 2008. Evolution of the European ecosystems during Pleistocene-Holocene transition (24–8 kyr BP). Moscow: KMK Scientific Press. 556 p.

  • Martin R.A., Peláez-Campomanes P., Honey J.G., Fox D.L., Zakrzewski R.J., Albright L.B., Lindsay E.H., Opdyke N.D. & Goodwin H.T. 2008. Rodent community change at the Pliocene–Pleistocene transition in southwestern Kansas and identification of the Microtus immigration event on the Central Great Plains // Palaeogeography, Palaeoclimatology, Palaeoecology. Vol.267. No.3–4. P.196–207.

  • McLean B.S., Batsaikhan N., Tchabovsky A. & Cook J.A. 2018. Impacts of late Quaternary environmental change on the long-tailed ground squirrel (Urocitellus undulatus) in Mongolia // Zoological Research. Vol.39. No.5. P.364–372.

  • Muscarella R., Galante P.J., Soley-Guardia M., Boria R.A., Kass J.M., Uriarte M. & Anderson R.P. 2014. ENMeval: An R package for conducting spatially independent evaluations and estimating optimal model complexity for Maxent ecological niche models // Methods in Ecology and Evolution. Vol.5. P.1198–1205.

  • Namzalov B.B. 2009. Baikal phytogeographic node as the newest center of endemism of Inner Asia // Contemporary Problems of Ecology. Vol.2. No.4. P.340–346.

  • Namzalov B.B. 2020. Extrazonal steppe phenomena in the mountains of Southern Siberia: features of spatial organization and centers of the latest speciation and cenogenesis // Contemporary Problems of Ecology. Vol.13. No.5. P.495–504.

  • Namzalov B.B. 2021. [The most important nodes of biodiversity and phytogeographic phenomena of mountain steppes of Southern Siberia] // Arid ecosystems. Vol.27. No.3. P.24–36 [in Russian].

  • Peterson G.I. & Masel J. 2009. Quantitative prediction of molecular clock and ka/ks at short timescales // Molecular Biology and Evolution. Vol.26. No.11. P.2595–2603.

  • Petrova T.V. 2017. [Narrow-headed vole Lasiopodomys (Stenocranius) gregalis (Pallas, 1779): taxonomic structure, phylogenetic position and evolution]. Saint Petersburg: Zoological Institute RAS. 141 p. [in Russian].

  • Petrova T.V., Dvoyashov I.A., Bazhenov Y.A., Obolenskaya E.V. & Lissovsky A.A. 2023. An invisible boundary between geographic ranges of cryptic species of narrow-headed voles (Stenocranius, Lasiopodomys, Cricetidae) in Transbaikalia // Diversity. Vol.15. No.3. P.439.

  • Petrova T.V., Genelt-Yanovskiy E.A., Lissovsky A.A., Chash U.-M.G., Masharsky A.E. & Abramson N.I. 2021. Signatures of genetic isolation of the three lineages of the narrow-headed vole Lasiopodomys gregalis (Cricetidae, Rodentia) in a mosaic steppe landscape of South Siberia // Mammalian Biology. Vol.101. No.3. P.275–285.

  • Petrova T.V., Tesakov A.S., Kowalskaya Y.M. & Abramson N.I. 2016. Cryptic speciation in the narrow-headed vole Lasiopodomys (Stenocranius) gregalis (Rodentia: Cricetidae) // Zoologica Scripta. Vol.45. No.6. P.618–629.

  • Petrova T.V., Zakharov E.S., Samiya R. & Abramson N.I. 2015. Phylogeography of the narrow-headed vole Lasiopodomys (Stenocranius) gregalis (Cricetidae, Rodentia) inferred from mitochondrial cytochrome b sequences: an echo of Pleistocene prosperity // Journal of Zoological Systematics and Evolutionary Research. Vol.53. No.2. P.97–108.

  • Poplavskaya N., Bannikova A., Neumann K., Pavlenko M., Kartavtseva I., Bazhenov Y., Bogomolov P., Abramov A., Surov A. & Lebedev V. 2019. Phylogeographic structure in the chromosomally polymorphic rodent Cricetulus barabensis sensu lato (Mammalia, Cricetidae) // Journal of Zoological Systematics and Evolutionary Research. Vol.57. No.3. P.679–694.

  • Prost S., Guralnick R.P., Waltari E., Fedorov V.B., Kuzmina E., Smirnov N., Van Kolfschoten T., Hofreiter M. & Vrieling K. 2013. Losing ground: past history and future fate of Arctic small mammals in a changing climate // Global Change Biology. Vol.19. No.6. P.1854–1864.

  • Rambaut A., Drummond A.J., Xie D., Baele G. & Suchard M.A. 2018. Posterior summarization in bayesian phylogenetics using Tracer 1.7 // Systematic Biology. Vol.67. No.5. P.901–904.

  • Ronquist F., Teslenko M., Van der Mark P., Ayres D.L., Darling A., Höhna S., Larget B., Liu L., Suchard M.A. & Huelsenbeck J.P. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space // Systematic Biology. Vol.61. No.3. P.539–542.

  • Rozas J., Ferrer-Mata A., Sánchez-DelBarrio J.C., Guirao-Rico S., Librado P., Ramos-Onsins S.E. & Sánchez-Gracia A. 2017. DnaSP 6: DNA sequence polymorphism analysis of large data sets // Molecular Biology and Evolution. Vol.34. No.12. P.3299–3302.

  • Tesakov A.S., Vangengeim E.A. & Pevzner M.A. 1999. Findings of the oldest rootless voles Allophaiomys and Prolagurus in Eastern Europe // Doklady of the Russian Academy of Sciences / Earth Science Section : Vol.366. P.452.

  • Thompson J.D., Higgins D.G. & Gibson T.J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice // Nucleic Acids Research. Vol.22. No.22. P.4673–4680.

  • Trifinopoulos J., Nguyen L.-T., Von Haeseler A. & Minh B.Q. 2016. W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis // Nucleic Acids Research. Vol.44. No.W1. P.W232–W235.

  • Zheng S. & Zhang Z. 2001. Late Miocene–Early Pleistocene micromammals from Wenwanggou of Lingtai, Gansu, China // Vertebrata PalAsiatica. Vol.38. No.1. P.58–71.

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